Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole biosynthesis protein thih | HMPREF3040_01781 | Not Available | Negative | 1726107 - 1727240 | 43294.5 |
| thiazole biosynthesis protein thig | HMPREF3040_01782 | Not Available | Negative | 1727237 - 1728007 | 26901.7 |
| thiamine biosynthesis protein this | HMPREF3040_01783 | Not Available | Negative | 1728009 - 1728209 | 7337.8 |
| thiazole biosynthesis adenylyltransferase thif | HMPREF3040_01784 | Not Available | Negative | 1728193 - 1728948 | 26997.4 |
| thiamine-phosphate diphosphorylase | HMPREF3040_01785 | Not Available | Negative | 1728941 - 1729576 | 23016.6 |
| thiamine biosynthesis protein thic | HMPREF3040_01786 | Not Available | Negative | 1729576 - 1731471 | 70786.3 |
| regulator of sigma d | HMPREF3040_01787 | Not Available | Negative | 1731704 - 1732180 | 18243.9 |
| nad(+) diphosphatase | HMPREF3040_01788 | Not Available | Positive | 1732275 - 1733048 | 29704.6 |
| uroporphyrinogen decarboxylase | HMPREF3040_01789 | Not Available | Positive | 1733088 - 1734152 | 39250.4 |
| deoxyribonuclease v | HMPREF3040_01790 | Not Available | Positive | 1734162 - 1734833 | 24673.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





