Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HMPREF3040_01759 | Not Available | Negative | 1700788 - 1702680 | 71566.4 |
| ribosomal rna large subunit methyltransferase l | HMPREF3040_01760 | Not Available | Negative | 1702707 - 1704815 | 78809.5 |
| mosc domain protein | HMPREF3040_01761 | Not Available | Positive | 1705101 - 1706168 | 39027.5 |
| hypothetical protein | HMPREF3040_01762 | Not Available | Negative | 1706165 - 1706707 | 20589.9 |
| dihydroorotate oxidase | HMPREF3040_01763 | Not Available | Negative | 1706881 - 1707891 | 36791.7 |
| fmn reductase | HMPREF3040_01764 | Not Available | Positive | 1708128 - 1708703 | 21240.5 |
| abc transporter, substrate-binding protein, aliphatic sulfonates family | HMPREF3040_01765 | Not Available | Positive | 1708696 - 1709655 | 34626.8 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | HMPREF3040_01766 | Not Available | Positive | 1709652 - 1710797 | 41763.7 |
| putative aliphatic sulfonates transport permease protein ssuc | HMPREF3040_01767 | Not Available | Positive | 1710806 - 1711600 | 29118.5 |
| abc transporter, atp-binding protein | HMPREF3040_01768 | Not Available | Positive | 1711597 - 1712364 | 27837.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





