Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division inhibitor sula | HMPREF3040_01749 | Not Available | Positive | 1691870 - 1692250 | 14164.2 |
| hypothetical protein | HMPREF3040_01750 | Not Available | Negative | 1692234 - 1692452 | 8229.13 |
| outer membrane protein a | HMPREF3040_01751 | Not Available | Positive | 1692582 - 1693646 | 38107.8 |
| hypothetical protein | HMPREF3040_01752 | Not Available | Negative | 1693722 - 1694174 | 17694.4 |
| lon protease proteolytic domain protein | HMPREF3040_01753 | Not Available | Positive | 1694360 - 1696120 | 65728.2 |
| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase faba | HMPREF3040_01754 | Not Available | Positive | 1696081 - 1696707 | 23066.3 |
| ribosome modulation factor | HMPREF3040_01755 | Not Available | Negative | 1696777 - 1696944 | 6507.88 |
| hypothetical protein | HMPREF3040_01756 | Not Available | Negative | 1697200 - 1697763 | 20635.5 |
| hypothetical protein | HMPREF3040_01757 | Not Available | Negative | 1697760 - 1699418 | 61170.8 |
| integral membrane protein, pqia family | HMPREF3040_01758 | Not Available | Negative | 1699405 - 1700607 | 44432.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





