Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_04527 | Not Available | Negative | 4306614 - 4306967 | 13399.2 |
| hypothetical protein | HMPREF3040_04528 | Not Available | Positive | 4307107 - 4307328 | 7988.42 |
| Gp1 | HMPREF3040_04529 | Not Available | Positive | 4307450 - 4307959 | 19171.9 |
| Dna packaging protein | HMPREF3040_04530 | Not Available | Positive | 4307931 - 4309859 | 72872.8 |
| Head-tail connector gpw | HMPREF3040_04531 | Not Available | Positive | 4309843 - 4310049 | 7700.46 |
| Bacteriophage portal protein | HMPREF3040_04532 | Not Available | Positive | 4310046 - 4311638 | 59611.5 |
| Bacteriophage prohead protease | HMPREF3040_04533 | Not Available | Positive | 4311628 - 4313076 | 50353.4 |
| Bacteriophage head decoration protein | HMPREF3040_04534 | Not Available | Positive | 4313113 - 4313460 | 11965.1 |
| Bacteriophage major capsid protein | HMPREF3040_04535 | Not Available | Positive | 4313518 - 4314546 | 38558.0 |
| Head assembly protein fi | HMPREF3040_04536 | Not Available | Positive | 4314565 - 4314972 | 14662.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





