Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease-1 | HMPREF3040_01659 | Not Available | Positive | 1612117 - 1612824 | 26710.5 |
| 16s rrna methyltransferase rsme | HMPREF3040_01660 | Not Available | Positive | 1613003 - 1613635 | 23193.1 |
| glutathione synthase | HMPREF3040_01661 | Not Available | Positive | 1613648 - 1614598 | 35563.0 |
| putative acr | HMPREF3040_01662 | Not Available | Positive | 1614635 - 1615270 | 23333.4 |
| rnase h domain protein, yqgf family | HMPREF3040_01663 | Not Available | Positive | 1615270 - 1615686 | 15187.2 |
| twitching motility protein | HMPREF3040_01664 | Not Available | Negative | 1615801 - 1616781 | 35942.3 |
| pyridoxal phosphate enzyme, yggs family | HMPREF3040_01665 | Not Available | Positive | 1616799 - 1617503 | 25787.9 |
| yggt family protein | HMPREF3040_01666 | Not Available | Positive | 1617521 - 1618087 | 21168.5 |
| tigr00251 family protein | HMPREF3040_01667 | Not Available | Positive | 1618084 - 1618374 | 10429.8 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | HMPREF3040_01668 | Not Available | Positive | 1618382 - 1618975 | 20997.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





