Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | HMPREF3040_01649 | Not Available | Negative | 1603759 - 1604679 | 33558.9 |
| hypothetical protein | HMPREF3040_01650 | Not Available | Negative | 1604815 - 1605546 | 26250.5 |
| arginine 2-monooxygenase | HMPREF3040_01651 | Not Available | Negative | 1605692 - 1607668 | 73890.6 |
| hypothetical protein | HMPREF3040_01652 | Not Available | Negative | 1607677 - 1607823 | 5430.82 |
| hypothetical protein | HMPREF3040_01653 | Not Available | Negative | 1607902 - 1608045 | 5220.17 |
| hypothetical protein | HMPREF3040_01654 | Not Available | Negative | 1608156 - 1608407 | 9562.84 |
| methionine adenosyltransferase | HMPREF3040_01655 | Not Available | Positive | 1608463 - 1609617 | 41954.0 |
| hypothetical protein | HMPREF3040_01656 | Not Available | Positive | 1609680 - 1609895 | 8335.13 |
| galactose-proton symporter | HMPREF3040_01657 | Not Available | Positive | 1610054 - 1611448 | 50985.6 |
| metallopeptidase, sprt family | HMPREF3040_01658 | Not Available | Positive | 1611525 - 1612022 | 19322.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





