Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HMPREF3040_01609 | Not Available | Negative | 1554039 - 1555841 | 66469.4 |
| abc transporter, atp-binding protein | HMPREF3040_01610 | Not Available | Negative | 1555828 - 1557540 | 62814.6 |
| transcriptional regulator, arac family | HMPREF3040_01611 | Not Available | Positive | 1557797 - 1558756 | 35823.0 |
| condensation domain protein | HMPREF3040_01612 | Not Available | Positive | 1558947 - 1565054 | 228749.0 |
| beta-ketoacyl synthase protein | HMPREF3040_01613 | Not Available | Positive | 1565142 - 1574633 | 348843.0 |
| thiazolinyl imide reductase | HMPREF3040_01614 | Not Available | Positive | 1574630 - 1575730 | 40882.1 |
| thioesterase domain protein | HMPREF3040_01615 | Not Available | Positive | 1575742 - 1576530 | 29206.7 |
| putativeadenylate synthase | HMPREF3040_01616 | Not Available | Positive | 1576534 - 1578111 | 57222.5 |
| pesticin receptor | HMPREF3040_01617 | Not Available | Positive | 1578242 - 1580263 | 73687.1 |
| hypothetical protein | HMPREF3040_01618 | Not Available | Positive | 1581134 - 1582060 | 35436.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





