Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01568 | Not Available | Positive | 1512367 - 1512597 | 8710.87 |
| mannosyl-3-phosphoglycerate phosphatase-like protein | HMPREF3040_01570 | Not Available | Positive | 1512895 - 1513710 | 30458.0 |
| diguanylate cyclase domain protein | HMPREF3040_01571 | Not Available | Negative | 1513707 - 1515017 | 49283.4 |
| hypothetical protein | HMPREF3040_01572 | Not Available | Positive | 1515078 - 1515431 | 13545.3 |
| hypothetical protein | HMPREF3040_01573 | Not Available | Negative | 1515572 - 1515754 | 6688.89 |
| hypothetical protein | HMPREF3040_01574 | Not Available | Negative | 1515833 - 1516750 | 32134.7 |
| carboxylate/amino acid/amine transporter | HMPREF3040_01575 | Not Available | Positive | 1516923 - 1517843 | 32210.0 |
| dna mismatch endonuclease vsr | HMPREF3040_01576 | Not Available | Negative | 1517832 - 1518302 | 17987.6 |
| dna (cytosine-5-)-methyltransferase | HMPREF3040_01577 | Not Available | Negative | 1518283 - 1519701 | 53406.7 |
| hd domain protein | HMPREF3040_01578 | Not Available | Negative | 1519768 - 1520463 | 25876.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





