Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_03967 | Not Available | Negative | 3770465 - 3770620 | 5886.13 |
| Antitermination protein q | HMPREF3040_03968 | Not Available | Negative | 3770652 - 3771404 | 28040.9 |
| Hypothetical protein | HMPREF3040_03969 | Not Available | Negative | 3771418 - 3772440 | 38305.0 |
| Putative r protein | HMPREF3040_04520 | Not Available | Positive | 4304387 - 4304899 | 18642.3 |
| hypothetical protein | HMPREF3040_04522 | Not Available | Negative | 4304842 - 4305057 | 8022.73 |
| hypothetical protein | HMPREF3040_04521 | Not Available | Positive | 4305023 - 4305238 | 7790.05 |
| Hypothetical protein | HMPREF3040_04523 | Not Available | Positive | 4305253 - 4305384 | 4606.11 |
| Putative endopeptidase rz | HMPREF3040_04524 | Not Available | Positive | 4305396 - 4305854 | 16950.3 |
| hypothetical protein | HMPREF3040_04525 | Not Available | Positive | 4306013 - 4306147 | 4784.58 |
| tonb family domain protein | HMPREF3040_04526 | Not Available | Positive | 4306165 - 4306491 | 12529.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





