Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellin protein | HMPREF3040_01538 | Not Available | Negative | 1489335 - 1490999 | 57246.7 |
| flagellar hook-associated protein 2 | HMPREF3040_01539 | Not Available | Positive | 1491265 - 1492671 | 48528.1 |
| flagellar protein flis | HMPREF3040_01540 | Not Available | Positive | 1492696 - 1493106 | 15020.1 |
| flagellar protein flit | HMPREF3040_01541 | Not Available | Positive | 1493106 - 1493471 | 13801.6 |
| cytoplasmic alpha-amylase | HMPREF3040_01542 | Not Available | Positive | 1493549 - 1495036 | 56589.2 |
| hypothetical protein | HMPREF3040_01543 | Not Available | Negative | 1495070 - 1495486 | 15133.3 |
| yeee/yede family protein | HMPREF3040_01544 | Not Available | Positive | 1495670 - 1496875 | 44445.5 |
| hypothetical protein | HMPREF3040_01545 | Not Available | Positive | 1496872 - 1497105 | 8639.5 |
| hypothetical protein | HMPREF3040_01546 | Not Available | Positive | 1497212 - 1497880 | 24991.6 |
| acetyltransferase, gnat family | HMPREF3040_01547 | Not Available | Positive | 1497991 - 1498386 | 14708.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





