Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalose-phosphate synthase | HMPREF3040_01508 | Not Available | Negative | 1467383 - 1468807 | 53600.0 |
| trehalose-phosphatase | HMPREF3040_01509 | Not Available | Negative | 1468782 - 1469639 | 31499.8 |
| l-arabinose abc transporter, permease protein arah | HMPREF3040_01510 | Not Available | Negative | 1469749 - 1470657 | 31504.0 |
| l-arabinose abc transporter, atp-binding protein arag | HMPREF3040_01511 | Not Available | Negative | 1470750 - 1472309 | 56761.8 |
| l-arabinose-binding periplasmic protein | HMPREF3040_01512 | Not Available | Negative | 1472334 - 1473374 | 37547.4 |
| ferritin-like protein | HMPREF3040_01513 | Not Available | Positive | 1474120 - 1474623 | 18895.6 |
| hypothetical protein | HMPREF3040_01514 | Not Available | Negative | 1474703 - 1474954 | 9123.11 |
| hypothetical protein | HMPREF3040_01515 | Not Available | Positive | 1475066 - 1475212 | 5654.95 |
| hypothetical protein | HMPREF3040_01516 | Not Available | Positive | 1475418 - 1475741 | 11756.1 |
| hypothetical protein | HMPREF3040_01517 | Not Available | Negative | 1475747 - 1475887 | 5620.19 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





