Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cher methyltransferase, sam binding domain protein | HMPREF3040_01497 | Not Available | Negative | 1456474 - 1457289 | 31289.4 |
| methyl-accepting chemotaxis protein iv | HMPREF3040_01498 | Not Available | Negative | 1457353 - 1458954 | 57598.3 |
| methyl-accepting chemotaxis protein i | HMPREF3040_01499 | Not Available | Negative | 1459000 - 1460661 | 59981.2 |
| chemotaxis protein chew | HMPREF3040_01501 | Not Available | Negative | 1460806 - 1461309 | 18118.9 |
| chemotaxis protein chea | HMPREF3040_01502 | Not Available | Negative | 1461330 - 1463288 | 71227.4 |
| chemotaxis protein motb | HMPREF3040_01503 | Not Available | Negative | 1463299 - 1464225 | 34188.1 |
| flagellar motor stator protein mota | HMPREF3040_01504 | Not Available | Negative | 1464222 - 1465109 | 32008.4 |
| flagellar transcriptional activator flhc | HMPREF3040_01505 | Not Available | Negative | 1465236 - 1465814 | 21567.3 |
| transcriptional activator flhd | HMPREF3040_01506 | Not Available | Negative | 1465817 - 1466167 | 13317.2 |
| universal stress family protein | HMPREF3040_01507 | Not Available | Positive | 1466948 - 1467376 | 15655.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





