Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein cutc | HMPREF3040_01487 | Not Available | Negative | 1447222 - 1447938 | 25435.6 |
| yecm protein | HMPREF3040_01488 | Not Available | Negative | 1447982 - 1448548 | 21223.1 |
| arginine--trna ligase | HMPREF3040_01489 | Not Available | Positive | 1448764 - 1450497 | 64672.6 |
| flhe protein | HMPREF3040_01490 | Not Available | Negative | 1450550 - 1450945 | 14199.6 |
| flagellar biosynthesis protein flha | HMPREF3040_01491 | Not Available | Negative | 1450942 - 1453020 | 74755.5 |
| flagellar biosynthetic protein flhb | HMPREF3040_01492 | Not Available | Negative | 1453013 - 1454161 | 42256.5 |
| hypothetical protein | HMPREF3040_01493 | Not Available | Positive | 1454194 - 1454328 | 4953.06 |
| chemotaxis protein chez | HMPREF3040_01494 | Not Available | Negative | 1454363 - 1455007 | 23977.4 |
| chemotaxis protein chey | HMPREF3040_01495 | Not Available | Negative | 1455018 - 1455407 | 14098.2 |
| protein-glutamate methylesterase | HMPREF3040_01496 | Not Available | Negative | 1455422 - 1456471 | 37427.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





