Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase domain protein | HMPREF3040_01417 | Not Available | Positive | 1371322 - 1372212 | 33879.5 |
| transporter, major facilitator family protein | HMPREF3040_01419 | Not Available | Negative | 1372653 - 1373753 | 39629.7 |
| hypothetical protein | HMPREF3040_01418 | Not Available | Positive | 1373746 - 1373880 | 5070.2 |
| o-acetylserine/cysteine export protein eama | HMPREF3040_01420 | Not Available | Positive | 1374014 - 1374934 | 33161.3 |
| putative multiple antibiotic resistance protein marb | HMPREF3040_01421 | Not Available | Negative | 1374965 - 1375183 | 7594.07 |
| multiple antibiotic resistance protein mara | HMPREF3040_01422 | Not Available | Negative | 1375215 - 1375604 | 15417.3 |
| multiple antibiotic resistance protein marr | HMPREF3040_01423 | Not Available | Negative | 1375618 - 1375995 | 13903.2 |
| membrane protein, marc family | HMPREF3040_01424 | Not Available | Positive | 1376264 - 1376929 | 23618.7 |
| sugar efflux transporter | HMPREF3040_01425 | Not Available | Negative | 1376954 - 1378144 | 42632.9 |
| hypothetical protein | HMPREF3040_01426 | Not Available | Negative | 1378294 - 1379409 | 42882.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





