Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caudovirales tail fiber assembly protein | HMPREF3040_01407 | Not Available | Positive | 1360759 - 1361334 | 21322.9 |
| putative dna-invertase from lambdoid prophage rac | HMPREF3040_01408 | Not Available | Negative | 1361432 - 1362022 | 21909.8 |
| hypothetical protein | HMPREF3040_01409 | Not Available | Negative | 1362339 - 1362605 | 10136.6 |
| mfs transporter, metabolite:h+ symporter family protein | HMPREF3040_01410 | Not Available | Positive | 1363358 - 1364641 | 46242.9 |
| mannitol dehydrogenase domain protein | HMPREF3040_01411 | Not Available | Positive | 1364731 - 1366191 | 53674.4 |
| putative selenium-binding protein ydfz | HMPREF3040_01412 | Not Available | Negative | 1366227 - 1366430 | 7276.83 |
| transcriptional regulator, gntr family | HMPREF3040_01413 | Not Available | Negative | 1366607 - 1367293 | 26580.7 |
| serine 3-dehydrogenase | HMPREF3040_01414 | Not Available | Negative | 1367382 - 1368128 | 27234.5 |
| peptidyl-dipeptidase dcp | HMPREF3040_01415 | Not Available | Positive | 1368274 - 1370310 | 77247.4 |
| tigr00156 family protein | HMPREF3040_01416 | Not Available | Positive | 1370675 - 1371067 | 14121.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





