Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh/band 7/phb domain protein | HMPREF3040_01356 | Not Available | Positive | 1313968 - 1314876 | 33066.9 |
| hypothetical protein | HMPREF3040_01357 | Not Available | Positive | 1314937 - 1316542 | 62289.1 |
| chorismate lyase | HMPREF3040_01358 | Not Available | Positive | 1316765 - 1317262 | 18826.0 |
| 4-hydroxybenzoate polyprenyl transferase | HMPREF3040_01359 | Not Available | Positive | 1317275 - 1318147 | 32513.6 |
| glycerol-3-phosphate o-acyltransferase | HMPREF3040_01360 | Not Available | Negative | 1318302 - 1320725 | 91386.9 |
| diacylglycerol kinase | HMPREF3040_01361 | Not Available | Positive | 1320896 - 1321264 | 13211.4 |
| repressor lexa | HMPREF3040_01362 | Not Available | Positive | 1321374 - 1321982 | 22359.1 |
| mate efflux family protein | HMPREF3040_01363 | Not Available | Positive | 1322055 - 1323380 | 47667.9 |
| csbd-like protein | HMPREF3040_01364 | Not Available | Positive | 1323496 - 1323705 | 8325.67 |
| transcriptional regulator, fur family | HMPREF3040_01365 | Not Available | Negative | 1323747 - 1324262 | 19245.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





