Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01336 | Not Available | Negative | 1297390 - 1298130 | 26636.7 |
| arginine exporter protein argo | HMPREF3040_01337 | Not Available | Negative | 1298223 - 1298816 | 21654.2 |
| bacterial extracellular solute-binding protein, family 7 | HMPREF3040_01338 | Not Available | Positive | 1298974 - 1300017 | 39453.3 |
| small-conductance mechanosensitive channel | HMPREF3040_01339 | Not Available | Negative | 1300059 - 1300934 | 31554.7 |
| hypothetical protein | HMPREF3040_01340 | Not Available | Negative | 1300957 - 1301373 | 15799.3 |
| fructose-bisphosphate aldolase, class ii | HMPREF3040_01341 | Not Available | Negative | 1301292 - 1302371 | 39149.4 |
| phosphoglycerate kinase | HMPREF3040_01342 | Not Available | Negative | 1302585 - 1303748 | 41120.5 |
| d-erythrose-4-phosphate dehydrogenase | HMPREF3040_01343 | Not Available | Negative | 1303798 - 1304817 | 37301.5 |
| hypothetical protein | HMPREF3040_01344 | Not Available | Positive | 1305189 - 1305620 | 15505.7 |
| hypothetical protein | HMPREF3040_01345 | Not Available | Positive | 1305643 - 1306221 | 20224.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





