Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate binding domain protein | HMPREF3040_01326 | Not Available | Negative | 1286441 - 1287337 | 32794.9 |
| flavodoxin-like protein | HMPREF3040_01327 | Not Available | Positive | 1287438 - 1288067 | 22916.6 |
| hypothetical protein | HMPREF3040_01328 | Not Available | Positive | 1288084 - 1288344 | 9569.31 |
| oxidoreductase nad-binding domain protein | HMPREF3040_01329 | Not Available | Positive | 1288406 - 1289731 | 50043.2 |
| initiation inhibitor | HMPREF3040_01330 | Not Available | Positive | 1289802 - 1290695 | 33473.6 |
| methylmalonyl-coa mutase | HMPREF3040_01331 | Not Available | Positive | 1290899 - 1293043 | 77823.6 |
| lao/ao transport system atpase | HMPREF3040_01332 | Not Available | Positive | 1293036 - 1294031 | 36602.1 |
| enoyl-coa hydratase/isomerase family protein | HMPREF3040_01333 | Not Available | Positive | 1294042 - 1294827 | 29208.3 |
| succinate coa transferase | HMPREF3040_01334 | Not Available | Positive | 1294851 - 1296329 | 53858.6 |
| transcriptional regulator, lysr family | HMPREF3040_01335 | Not Available | Negative | 1296326 - 1297222 | 34675.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





