Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum hydroxylase accessory protein, ygfj family | HMPREF3040_01284 | Not Available | Positive | 1243289 - 1243819 | 19881.2 |
| putative selenate reductase, ygfk subunit | HMPREF3040_01285 | Not Available | Positive | 1244141 - 1247239 | 115565.0 |
| protein ssna | HMPREF3040_01286 | Not Available | Positive | 1247242 - 1248570 | 48798.2 |
| putative selenate reductase, fad-binding subunit | HMPREF3040_01287 | Not Available | Positive | 1248621 - 1249400 | 28665.3 |
| putative selenate reductase, molybdenum-binding subunit | HMPREF3040_01288 | Not Available | Positive | 1249397 - 1252267 | 103569.0 |
| xanthine permease | HMPREF3040_01289 | Not Available | Positive | 1252375 - 1253832 | 51366.1 |
| guanine deaminase | HMPREF3040_01290 | Not Available | Positive | 1253847 - 1255166 | 50214.9 |
| putative permease | HMPREF3040_01291 | Not Available | Positive | 1255202 - 1256569 | 46761.0 |
| putative electron transport protein hydn | HMPREF3040_01292 | Not Available | Negative | 1256605 - 1257093 | 17544.4 |
| putative oxidoreductase fe-s binding subunit | HMPREF3040_01293 | Not Available | Negative | 1257093 - 1259027 | 69766.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





