Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster-binding domain protein | HMPREF3040_01274 | Not Available | Positive | 1231570 - 1232049 | 16874.7 |
| sigma-54 interaction domain protein | HMPREF3040_01275 | Not Available | Negative | 1232089 - 1233867 | 66057.0 |
| putative carbamoyltransferase ygew | HMPREF3040_01276 | Not Available | Positive | 1234344 - 1235534 | 44189.9 |
| diaminopropionate ammonia-lyase | HMPREF3040_01277 | Not Available | Positive | 1235592 - 1236788 | 43330.1 |
| putative selenium metabolism hydrolase | HMPREF3040_01278 | Not Available | Positive | 1236846 - 1238057 | 44806.4 |
| hypothetical protein | HMPREF3040_01279 | Not Available | Negative | 1238065 - 1238388 | 11804.1 |
| dihydropyrimidinase | HMPREF3040_01280 | Not Available | Positive | 1238389 - 1239495 | 41142.4 |
| carbamate kinase | HMPREF3040_01281 | Not Available | Positive | 1239543 - 1240475 | 33072.9 |
| selenium-dependent molybdenum hydroxylase system protein, yqeb family | HMPREF3040_01282 | Not Available | Negative | 1240695 - 1242320 | 57697.5 |
| putative selenium-dependent hydroxylase accessory protein yqec | HMPREF3040_01283 | Not Available | Negative | 1242368 - 1243138 | 28165.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





