Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion outer membrane pore, yscc/hrcc family | HMPREF3040_01264 | Not Available | Negative | 1222184 - 1223887 | 62757.4 |
| transcriptional regulator, arac family | HMPREF3040_01265 | Not Available | Negative | 1223884 - 1224633 | 28286.4 |
| hypothetical protein | HMPREF3040_01266 | Not Available | Negative | 1224979 - 1225215 | 8993.47 |
| hypothetical protein | HMPREF3040_01267 | Not Available | Negative | 1225224 - 1226846 | 61061.4 |
| hypothetical protein | HMPREF3040_01268 | Not Available | Positive | 1226889 - 1227014 | 4907.03 |
| Trna-gly | Not Available | Not Available | Positive | 1227067 - 1227140 | Not Available |
| peptidase, m23 family | HMPREF3040_01271 | Not Available | Negative | 1227219 - 1227569 | 12444.9 |
| hypothetical protein | HMPREF3040_01270 | Not Available | Positive | 1227568 - 1227735 | 5878.01 |
| aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein | HMPREF3040_01272 | Not Available | Positive | 1228387 - 1230684 | 82720.1 |
| fad binding domain in molybdopterin dehydrogenase | HMPREF3040_01273 | Not Available | Positive | 1230695 - 1231573 | 31558.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





