Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipid transporter lplt | HMPREF3040_01222 | Not Available | Negative | 1184815 - 1186008 | 41596.1 |
| acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase | HMPREF3040_01223 | Not Available | Negative | 1186001 - 1188160 | 80788.9 |
| hth-type transcriptional regulator galr | HMPREF3040_01226 | Not Available | Positive | 1188746 - 1189777 | 37096.2 |
| diaminopimelate decarboxylase | HMPREF3040_01227 | Not Available | Negative | 1189784 - 1191046 | 46178.1 |
| transcriptional activator protein lysr | HMPREF3040_01228 | Not Available | Positive | 1191168 - 1192103 | 34464.7 |
| aspartate racemase | HMPREF3040_01229 | Not Available | Negative | 1192090 - 1192782 | 25295.5 |
| arabinose-proton symporter | HMPREF3040_01230 | Not Available | Negative | 1192911 - 1194269 | 49387.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | HMPREF3040_01231 | Not Available | Negative | 1194644 - 1195405 | 27042.7 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | HMPREF3040_01232 | Not Available | Negative | 1195435 - 1196271 | 31078.1 |
| acetyl-coa c-acetyltransferase | HMPREF3040_01233 | Not Available | Negative | 1196559 - 1197740 | 41055.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





