Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type cleavage/methylation protein | HMPREF3040_01212 | Not Available | Negative | 1175852 - 1176322 | 17836.3 |
| hypothetical protein | HMPREF3040_01213 | Not Available | Positive | 1176332 - 1176514 | 6603.01 |
| thymidylate synthase | HMPREF3040_01214 | Not Available | Negative | 1176507 - 1177301 | 30481.4 |
| prolipoprotein diacylglyceryl transferase | HMPREF3040_01215 | Not Available | Negative | 1177308 - 1178183 | 33109.9 |
| phosphoenolpyruvate-protein phosphotransferase | HMPREF3040_01216 | Not Available | Negative | 1178334 - 1180580 | 83676.7 |
| rna pyrophosphohydrolase | HMPREF3040_01217 | Not Available | Negative | 1180593 - 1181123 | 20796.0 |
| dna mismatch repair endonuclease muth | HMPREF3040_01218 | Not Available | Positive | 1181808 - 1182497 | 25486.9 |
| integral membrane protein terc family protein | HMPREF3040_01219 | Not Available | Positive | 1182566 - 1183279 | 26159.0 |
| hypothetical protein | HMPREF3040_01220 | Not Available | Positive | 1183417 - 1183635 | 7877.35 |
| oxidoreductase, aldo/keto reductase family protein | HMPREF3040_01221 | Not Available | Positive | 1183743 - 1184783 | 38501.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





