Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1159751 - 1159827 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | HMPREF3040_01203 | Not Available | Negative | 1159902 - 1161245 | 48961.2 |
| amino-acid n-acetyltransferase | HMPREF3040_01204 | Not Available | Positive | 1161321 - 1162718 | 51653.1 |
| exodeoxyribonuclease v, alpha subunit | HMPREF3040_01205 | Not Available | Negative | 1162780 - 1164606 | 66756.1 |
| exodeoxyribonuclease v, beta subunit | HMPREF3040_01206 | Not Available | Negative | 1164606 - 1168148 | 134014.0 |
| protease 3 | HMPREF3040_01207 | Not Available | Negative | 1168141 - 1171029 | 107755.0 |
| exodeoxyribonuclease v, gamma subunit | HMPREF3040_01208 | Not Available | Negative | 1171205 - 1174573 | 128701.0 |
| prepilin-type cleavage/methylation protein | HMPREF3040_01209 | Not Available | Negative | 1174586 - 1174909 | 12004.7 |
| hypothetical protein | HMPREF3040_01210 | Not Available | Negative | 1174894 - 1175301 | 14953.3 |
| prepilin-type cleavage/methylation protein | HMPREF3040_01211 | Not Available | Negative | 1175298 - 1175861 | 20359.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





