Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopyruvate hydratase | HMPREF3040_01160 | Not Available | Negative | 1119447 - 1120745 | 45657.6 |
| ctp synthase | HMPREF3040_01161 | Not Available | Negative | 1120832 - 1122469 | 60377.7 |
| protein mazg | HMPREF3040_01162 | Not Available | Negative | 1122697 - 1123488 | 30428.0 |
| gtp diphosphokinase | HMPREF3040_01163 | Not Available | Negative | 1123584 - 1125818 | 83880.4 |
| 23s rrna (uracil-5-)-methyltransferase ruma | HMPREF3040_01164 | Not Available | Negative | 1125866 - 1127167 | 48106.1 |
| signal transduction histidine-protein kinase bara | HMPREF3040_01165 | Not Available | Positive | 1127224 - 1129980 | 102460.0 |
| hypothetical protein | HMPREF3040_01166 | Not Available | Negative | 1130068 - 1130226 | 5947.31 |
| glucarate dehydratase | HMPREF3040_01167 | Not Available | Negative | 1130211 - 1131575 | 50140.3 |
| glucarate dehydratase protein | HMPREF3040_01168 | Not Available | Negative | 1131572 - 1132879 | 47749.1 |
| putative glucarate transporter | HMPREF3040_01169 | Not Available | Negative | 1132914 - 1134266 | 49145.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





