Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | HMPREF3040_03878 | Not Available | Positive | 3697082 - 3697630 | 19584.2 |
| Tail protein | HMPREF3040_03879 | Not Available | Positive | 3697627 - 3698055 | 16404.6 |
| Tail protein | HMPREF3040_03880 | Not Available | Positive | 3698042 - 3699100 | 38285.2 |
| Tail protein | HMPREF3040_03881 | Not Available | Positive | 3699091 - 3699675 | 21603.5 |
| Tail protein | HMPREF3040_03882 | Not Available | Positive | 3699679 - 3700611 | 30581.8 |
| Tail fiber | HMPREF3040_03883 | Not Available | Positive | 3700612 - 3701016 | 14566.0 |
| hypothetical protein | HMPREF3040_03884 | Not Available | Negative | 3701097 - 3701321 | 8960.33 |
| hypothetical protein | HMPREF3040_03886 | Not Available | Negative | 3701318 - 3702298 | 37541.2 |
| hypothetical protein | HMPREF3040_03885 | Not Available | Positive | 3702297 - 3702704 | 15130.6 |
| O-antigen conversion protein | HMPREF3040_03887 | Not Available | Negative | 3702792 - 3703721 | 35011.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





