Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoadenosine phosphosulfate reductase | HMPREF3040_01140 | Not Available | Negative | 1097583 - 1098317 | 27977.3 |
| sulfite reductase hemoprotein, beta-component | HMPREF3040_01141 | Not Available | Negative | 1098391 - 1100103 | 63963.8 |
| sulfite reductase flavoprotein, alpha-component | HMPREF3040_01142 | Not Available | Negative | 1100103 - 1101902 | 66308.4 |
| queuosine biosynthesis protein qued | HMPREF3040_01143 | Not Available | Positive | 1102218 - 1102583 | 13799.7 |
| fad dependent oxidoreductase | HMPREF3040_01144 | Not Available | Positive | 1102661 - 1103932 | 46239.8 |
| hypothetical protein | HMPREF3040_01145 | Not Available | Positive | 1103923 - 1104183 | 9646.53 |
| glycerol-3-phosphate responsive antiterminator | HMPREF3040_01146 | Not Available | Positive | 1104200 - 1104775 | 20787.6 |
| electron transfer flavoprotein fad-binding domain protein | HMPREF3040_01147 | Not Available | Negative | 1104949 - 1105809 | 30255.2 |
| electron transfer flavoprotein | HMPREF3040_01148 | Not Available | Negative | 1105806 - 1106585 | 28625.8 |
| transporter, major facilitator family protein | HMPREF3040_01149 | Not Available | Negative | 1106563 - 1107972 | 50791.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





