Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubredoxin | HMPREF3040_01080 | Not Available | Positive | 1043862 - 1045301 | 54166.0 |
| nitric oxide reductase flrd-nad(+) reductase | HMPREF3040_01081 | Not Available | Positive | 1045298 - 1046431 | 41467.3 |
| carbamoyltransferase hypf | HMPREF3040_01082 | Not Available | Negative | 1046509 - 1048821 | 83799.7 |
| electron transport protein hydn domain protein | HMPREF3040_01083 | Not Available | Negative | 1048902 - 1049120 | 7965.71 |
| hypothetical protein | HMPREF3040_01084 | Not Available | Negative | 1049407 - 1049574 | 5945.29 |
| hth-type transcriptional regulator ascg | HMPREF3040_01085 | Not Available | Negative | 1049578 - 1050597 | 37148.9 |
| pts system, glucose-like iib component | HMPREF3040_01086 | Not Available | Positive | 1050848 - 1052305 | 51133.2 |
| aryl-phospho-beta-d-glucosidase bglh | HMPREF3040_01087 | Not Available | Positive | 1052308 - 1053738 | 54023.0 |
| hydrogenase maturation peptidase hyci | HMPREF3040_01088 | Not Available | Negative | 1053896 - 1054333 | 15924.1 |
| formate hydrogenlyase maturation protein hych | HMPREF3040_01089 | Not Available | Negative | 1054359 - 1054769 | 15495.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





