Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence/damage-inducible protein cina domain protein | HMPREF3040_01070 | Not Available | Negative | 1035234 - 1035731 | 17582.7 |
| lytic murein transglycosylase b | HMPREF3040_01071 | Not Available | Negative | 1035876 - 1036961 | 40300.1 |
| glucitol/sorbitol permease iic component | HMPREF3040_01072 | Not Available | Positive | 1037217 - 1037780 | 20581.6 |
| pts system, glucitol/sorbitol-specific, iibc component | HMPREF3040_01073 | Not Available | Positive | 1037777 - 1038736 | 33324.0 |
| pts system, glucitol/sorbitol-specific, iia component | HMPREF3040_01074 | Not Available | Positive | 1038747 - 1039118 | 13265.7 |
| sorbitol-6-phosphate 2-dehydrogenase | HMPREF3040_01075 | Not Available | Positive | 1039122 - 1039901 | 27799.4 |
| glucitol operon activator protein gutm | HMPREF3040_01076 | Not Available | Positive | 1040007 - 1040366 | 13008.1 |
| transcriptional regulator, deor family | HMPREF3040_01077 | Not Available | Positive | 1040433 - 1041206 | 28236.8 |
| putative arabinose 5-phosphate isomerase | HMPREF3040_01078 | Not Available | Positive | 1041199 - 1042164 | 34019.5 |
| anaerobic nitric oxide reductase transcription regulator norr | HMPREF3040_01079 | Not Available | Negative | 1042161 - 1043675 | 55159.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





