Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01060 | Not Available | Positive | 1028964 - 1029188 | 8283.09 |
| hypothetical protein | HMPREF3040_01061 | Not Available | Negative | 1029244 - 1029363 | 4660.69 |
| Trna-arg | Not Available | Not Available | Positive | 1029583 - 1029659 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1029858 - 1029934 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1029938 - 1030030 | Not Available |
| carbon storage regulator | HMPREF3040_01065 | Not Available | Negative | 1030346 - 1030531 | 6856.34 |
| alanine--trna ligase | HMPREF3040_01067 | Not Available | Negative | 1030766 - 1033120 | 85668.7 |
| hypothetical protein | HMPREF3040_01066 | Not Available | Positive | 1033082 - 1033483 | 14751.9 |
| regulatory protein recx | HMPREF3040_01068 | Not Available | Negative | 1033524 - 1034024 | 19411.1 |
| reca protein | HMPREF3040_01069 | Not Available | Negative | 1034093 - 1035169 | 38492.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





