Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative phage head-tail adaptor | HMPREF3040_03868 | Not Available | Positive | 3688830 - 3689240 | 15559.4 |
| Hypothetical protein | HMPREF3040_03869 | Not Available | Positive | 3689215 - 3689721 | 19588.8 |
| Hypothetical protein | HMPREF3040_03870 | Not Available | Positive | 3689718 - 3690278 | 20791.2 |
| Hypothetical protein | HMPREF3040_03871 | Not Available | Positive | 3690287 - 3690457 | 6393.55 |
| Tail sheath protein | HMPREF3040_03872 | Not Available | Positive | 3690441 - 3691937 | 53116.6 |
| Hypothetical protein | HMPREF3040_03873 | Not Available | Positive | 3691937 - 3692293 | 12890.0 |
| Hypothetical protein | HMPREF3040_03874 | Not Available | Positive | 3692290 - 3692613 | 11721.3 |
| Tail tape measure protein | HMPREF3040_03875 | Not Available | Positive | 3692698 - 3694605 | 67806.6 |
| Tail/dna circulation protein | HMPREF3040_03876 | Not Available | Positive | 3694720 - 3696006 | 46255.8 |
| Tail protein | HMPREF3040_03877 | Not Available | Positive | 3696003 - 3697082 | 39194.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





