Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol reductant abc exporter, cydd subunit | HMPREF3040_01030 | Not Available | Positive | 1003749 - 1005515 | 65056.9 |
| thiol reductant abc exporter, cydc subunit | HMPREF3040_01031 | Not Available | Positive | 1005516 - 1007237 | 62887.2 |
| leucyltransferase | HMPREF3040_01032 | Not Available | Positive | 1007279 - 1007983 | 26620.0 |
| translation initiation factor if-1 | HMPREF3040_01033 | Not Available | Positive | 1008268 - 1008486 | 8250.1 |
| Trna-ser | Not Available | Not Available | Positive | 1008740 - 1008827 | Not Available |
| hypothetical protein | HMPREF3040_01035 | Not Available | Positive | 1008841 - 1009448 | 23142.8 |
| hypothetical protein | HMPREF3040_01036 | Not Available | Positive | 1009449 - 1009892 | 16981.6 |
| replication protein p | HMPREF3040_01037 | Not Available | Positive | 1009874 - 1010674 | 30015.0 |
| hypothetical protein | HMPREF3040_01038 | Not Available | Positive | 1010792 - 1011136 | 13156.9 |
| hypothetical protein | HMPREF3040_01039 | Not Available | Positive | 1011198 - 1011815 | 22476.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





