Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | HMPREF3040_01020 | Not Available | Positive | 989035 - 989661 | 23089.5 |
| dmso reductase, anchor subunit dmsc | HMPREF3040_01021 | Not Available | Negative | 989697 - 990560 | 30882.3 |
| dimethylsulfoxide reductase, chain b | HMPREF3040_01022 | Not Available | Negative | 990562 - 991179 | 22870.1 |
| anaerobic dimethyl sulfoxide reductase chain a | HMPREF3040_01023 | Not Available | Negative | 991190 - 993634 | 90352.6 |
| serine--trna ligase | HMPREF3040_01024 | Not Available | Negative | 993873 - 995165 | 48416.8 |
| replication-associated recombination protein a | HMPREF3040_01025 | Not Available | Negative | 995256 - 996542 | 47519.4 |
| outer membrane lipoprotein carrier protein lola | HMPREF3040_01026 | Not Available | Negative | 996610 - 997224 | 22629.4 |
| putative dna translocase ftsk | HMPREF3040_01027 | Not Available | Negative | 997380 - 1001486 | 151169.0 |
| leucine responsive regulatory protein | HMPREF3040_01028 | Not Available | Negative | 1001621 - 1002166 | 20827.3 |
| thioredoxin-disulfide reductase | HMPREF3040_01029 | Not Available | Positive | 1002661 - 1003626 | 34585.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





