Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01000 | Not Available | Negative | 965441 - 966673 | 47667.6 |
| tetraacyldisaccharide 4'-kinase | HMPREF3040_01001 | Not Available | Negative | 966710 - 967696 | 35493.3 |
| lipid a export permease/atp-binding protein msba | HMPREF3040_01002 | Not Available | Negative | 967693 - 969441 | 64491.7 |
| dna internalization competence protein comec/rec2-like protein | HMPREF3040_01003 | Not Available | Negative | 969478 - 971742 | 84557.1 |
| integration host factor, beta subunit | HMPREF3040_01004 | Not Available | Negative | 971949 - 972233 | 10651.8 |
| ribosomal protein s1 | HMPREF3040_01005 | Not Available | Negative | 972393 - 974066 | 61161.5 |
| cytidylate kinase | HMPREF3040_01006 | Not Available | Negative | 974177 - 974860 | 24747.8 |
| hypothetical protein | HMPREF3040_01007 | Not Available | Negative | 974863 - 974988 | 4728.66 |
| peptidase, m48 family | HMPREF3040_01008 | Not Available | Negative | 975033 - 975806 | 27132.2 |
| hypothetical protein | HMPREF3040_01009 | Not Available | Positive | 975833 - 975979 | 5374.64 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





