Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00980 | Not Available | Negative | 942729 - 942881 | 5709.01 |
| membrane alanyl aminopeptidase | HMPREF3040_00981 | Not Available | Negative | 942999 - 945611 | 98947.1 |
| hypothetical protein | HMPREF3040_00982 | Not Available | Negative | 945647 - 945769 | 4498.69 |
| nicotinate phosphoribosyltransferase | HMPREF3040_00983 | Not Available | Positive | 945877 - 947079 | 45871.7 |
| asparagine--trna ligase | HMPREF3040_00984 | Not Available | Positive | 947248 - 948648 | 52573.2 |
| hypothetical protein | HMPREF3040_00985 | Not Available | Negative | 948772 - 948918 | 5572.1 |
| outer membrane protein | HMPREF3040_00986 | Not Available | Positive | 949251 - 950339 | 39347.5 |
| hypothetical protein | HMPREF3040_00988 | Not Available | Negative | 950355 - 950525 | 6648.24 |
| aminotransferase, class i/ii | HMPREF3040_00987 | Not Available | Positive | 950524 - 951714 | 43575.7 |
| metallo-beta-lactamase domain protein | HMPREF3040_00989 | Not Available | Negative | 951765 - 952412 | 23699.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





