Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichyl-phosphate-mannose-protein mannosyltransferase | HMPREF3040_00970 | Not Available | Negative | 931873 - 933525 | 62517.9 |
| polysaccharide deacetylase | HMPREF3040_00971 | Not Available | Negative | 933525 - 934415 | 33080.7 |
| udp-l-ara4n formyltransferase/udp-glca c-4'-decarboxylase | HMPREF3040_00972 | Not Available | Negative | 934412 - 936394 | 74179.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | HMPREF3040_00973 | Not Available | Negative | 936394 - 937362 | 36368.4 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | HMPREF3040_00974 | Not Available | Negative | 937366 - 938523 | 42219.0 |
| phosphoglycerate mutase family protein | HMPREF3040_00975 | Not Available | Positive | 938756 - 939415 | 24410.4 |
| nucleoside triphosphatase nudi | HMPREF3040_00976 | Not Available | Negative | 939454 - 939816 | 13941.5 |
| yfaz | HMPREF3040_00977 | Not Available | Positive | 940158 - 940700 | 18596.8 |
| cina-like protein | HMPREF3040_00978 | Not Available | Positive | 940800 - 942008 | 44427.4 |
| incfii family plasmid replication initiator repa | HMPREF3040_00979 | Not Available | Positive | 942037 - 942759 | 27537.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





