Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ndh-1 subunit m | HMPREF3040_00950 | Not Available | Positive | 915481 - 917010 | 56555.0 |
| nuo14 protein | HMPREF3040_00951 | Not Available | Positive | 917017 - 918474 | 52047.3 |
| hypothetical protein | HMPREF3040_00952 | Not Available | Negative | 918542 - 919045 | 19003.8 |
| peptidase, m28 family | HMPREF3040_00953 | Not Available | Negative | 919148 - 919966 | 29884.1 |
| hypothetical protein | HMPREF3040_00954 | Not Available | Positive | 920040 - 920198 | 6138.61 |
| hypothetical protein | HMPREF3040_00955 | Not Available | Positive | 920304 - 920438 | 4943.7 |
| deubiquitinase | HMPREF3040_00956 | Not Available | Negative | 920509 - 921717 | 45990.5 |
| hypothetical protein | HMPREF3040_00957 | Not Available | Positive | 921745 - 921918 | 6670.34 |
| ribonuclease bn | HMPREF3040_00958 | Not Available | Negative | 921908 - 922825 | 32945.7 |
| acetyltransferase, gnat family | HMPREF3040_00959 | Not Available | Positive | 922890 - 923351 | 17466.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





