Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase i subunit b | HMPREF3040_00940 | Not Available | Positive | 903909 - 904571 | 25057.3 |
| nadh dehydrogenase subunit d | HMPREF3040_00941 | Not Available | Positive | 904665 - 906467 | 68728.5 |
| ndh-1 subunit e | HMPREF3040_00942 | Not Available | Positive | 906470 - 906970 | 18591.1 |
| nadh oxidoreductase, f subunit | HMPREF3040_00943 | Not Available | Positive | 906967 - 908304 | 49323.3 |
| nadh dehydrogenase, g subunit | HMPREF3040_00944 | Not Available | Positive | 908351 - 911083 | 100494.0 |
| nuo8 protein | HMPREF3040_00945 | Not Available | Positive | 911080 - 912057 | 36221.3 |
| nadh-quinone oxidoreductase subunit i | HMPREF3040_00946 | Not Available | Positive | 912072 - 912614 | 20538.9 |
| nadh-quinone oxidoreductase subunit j | HMPREF3040_00947 | Not Available | Positive | 912626 - 913180 | 19875.9 |
| nadh dehydrogenase i subunit k | HMPREF3040_00948 | Not Available | Positive | 913177 - 913479 | 10845.8 |
| ndh-1 subunit l | HMPREF3040_00949 | Not Available | Positive | 913476 - 915317 | 66426.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





