Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00920 | Not Available | Positive | 884984 - 885874 | 34167.4 |
| tigr01777 family protein | HMPREF3040_00921 | Not Available | Negative | 885922 - 886815 | 32790.8 |
| dihydroneopterin aldolase | HMPREF3040_00922 | Not Available | Negative | 886836 - 887198 | 14082.8 |
| glutathione s-transferase protein | HMPREF3040_00923 | Not Available | Negative | 887255 - 887902 | 24475.2 |
| glutathione s-transferase protein | HMPREF3040_00924 | Not Available | Positive | 888038 - 888682 | 24333.0 |
| phosphodiesterase family protein | HMPREF3040_00925 | Not Available | Positive | 888738 - 889289 | 19992.1 |
| hydrolase, nudix family | HMPREF3040_00926 | Not Available | Positive | 889347 - 889889 | 20376.9 |
| c4-dicarboxylate anaerobic carrier | HMPREF3040_00927 | Not Available | Negative | 889922 - 891400 | 53184.1 |
| phosphate acetyltransferase | HMPREF3040_00928 | Not Available | Negative | 891632 - 893761 | 76561.7 |
| acetate kinase | HMPREF3040_00929 | Not Available | Negative | 893851 - 895053 | 43293.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





