Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00900 | Not Available | Negative | 868213 - 868362 | 5659.83 |
| transporter, major facilitator family protein | HMPREF3040_00901 | Not Available | Positive | 868376 - 869554 | 40453.7 |
| flagellar regulator flk | HMPREF3040_00902 | Not Available | Negative | 869551 - 870426 | 32574.6 |
| putative 4-phosphoerythronate dehydrogenase | HMPREF3040_00903 | Not Available | Positive | 870645 - 871781 | 41293.9 |
| semialdehyde dehydrogenase, dimerization domain protein | HMPREF3040_00904 | Not Available | Positive | 871847 - 872860 | 36324.1 |
| trna pseudouridine synthase a | HMPREF3040_00905 | Not Available | Positive | 872860 - 873672 | 30386.2 |
| snare-like domain protein | HMPREF3040_00906 | Not Available | Positive | 873755 - 874414 | 24618.8 |
| acetyl-coa carboxylase, carboxyl transferase, beta subunit | HMPREF3040_00907 | Not Available | Positive | 874486 - 875484 | 36595.8 |
| protein folc | HMPREF3040_00908 | Not Available | Positive | 875554 - 876822 | 45525.2 |
| sporulation and cell division repeat protein | HMPREF3040_00909 | Not Available | Positive | 876812 - 877474 | 23014.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





