Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smr domain protein | HMPREF3040_00890 | Not Available | Negative | 859319 - 859870 | 21000.5 |
| (glutamine-n5) methyltransferase, ribosomal protein l3-specific | HMPREF3040_00891 | Not Available | Positive | 860036 - 860968 | 35003.6 |
| chorismate synthase | HMPREF3040_00892 | Not Available | Positive | 861003 - 862088 | 39153.8 |
| peptidoglycan amidase mepa | HMPREF3040_00893 | Not Available | Positive | 862092 - 862916 | 30170.4 |
| hypothetical protein | HMPREF3040_00894 | Not Available | Positive | 862916 - 863725 | 28645.2 |
| hypothetical protein | HMPREF3040_00895 | Not Available | Positive | 863725 - 864273 | 21174.6 |
| yfcl protein | HMPREF3040_00896 | Not Available | Positive | 864307 - 864585 | 10000.6 |
| hypothetical protein | HMPREF3040_00897 | Not Available | Positive | 864606 - 864719 | 4282.26 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | HMPREF3040_00898 | Not Available | Negative | 864706 - 866712 | 74245.9 |
| beta-ketoacyl-acyl-carrier-protein synthase i | HMPREF3040_00899 | Not Available | Positive | 866871 - 868091 | 42615.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





