Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty oxidation complex, alpha subunit fadj | HMPREF3040_00880 | Not Available | Positive | 849265 - 851409 | 77155.0 |
| hypothetical protein | HMPREF3040_00882 | Not Available | Negative | 851483 - 851635 | 5899.23 |
| phosphohistidine phosphatase sixa | HMPREF3040_00881 | Not Available | Positive | 851612 - 852097 | 17208.8 |
| fimbrial protein | HMPREF3040_00883 | Not Available | Positive | 852759 - 853325 | 19874.4 |
| putative outer membrane usher protein papc | HMPREF3040_00884 | Not Available | Positive | 853397 - 856048 | 97439.2 |
| gram-negative pili assembly chaperone domain protein | HMPREF3040_00885 | Not Available | Positive | 856068 - 856817 | 27768.4 |
| hypothetical protein | HMPREF3040_00886 | Not Available | Positive | 856927 - 857340 | 14561.4 |
| fimbrial protein | HMPREF3040_00887 | Not Available | Positive | 857337 - 857807 | 17173.3 |
| fimbrial protein | HMPREF3040_00888 | Not Available | Positive | 857804 - 858328 | 18148.5 |
| hypothetical protein | HMPREF3040_00889 | Not Available | Positive | 858420 - 859178 | 27613.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





