Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | HMPREF3040_00870 | Not Available | Positive | 839180 - 840103 | 33367.0 |
| galactoside permease | HMPREF3040_00871 | Not Available | Positive | 840165 - 841412 | 46882.3 |
| hypothetical protein | HMPREF3040_00872 | Not Available | Negative | 841492 - 841632 | 5411.19 |
| Trna-arg | Not Available | Not Available | Positive | 841854 - 841928 | Not Available |
| hypothetical protein | HMPREF3040_00874 | Not Available | Negative | 842004 - 842936 | 34484.2 |
| vacj-like protein | HMPREF3040_00875 | Not Available | Positive | 843230 - 843985 | 28009.2 |
| hypothetical protein | HMPREF3040_00876 | Not Available | Negative | 844164 - 845411 | 47077.4 |
| long-chain fatty acid transport protein | HMPREF3040_00877 | Not Available | Negative | 845778 - 847124 | 48743.4 |
| hypothetical protein | HMPREF3040_00878 | Not Available | Positive | 847532 - 847774 | 8859.38 |
| acetyl-coa c-acyltransferase fadi | HMPREF3040_00879 | Not Available | Positive | 847955 - 849265 | 46519.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





