Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, auxin efflux carrier family protein | HMPREF3040_00860 | Not Available | Positive | 825065 - 826009 | 33617.9 |
| iii protein, coa-transferase family | HMPREF3040_00861 | Not Available | Positive | 826083 - 827228 | 41689.2 |
| sensor protein evgs | HMPREF3040_00862 | Not Available | Negative | 827283 - 830876 | 134981.0 |
| positive transcription regulator evga | HMPREF3040_00863 | Not Available | Negative | 830881 - 831495 | 22691.5 |
| multidrug resistance protein a | HMPREF3040_00864 | Not Available | Positive | 832019 - 833074 | 38406.8 |
| multidrug resistance protein b | HMPREF3040_00865 | Not Available | Positive | 833074 - 834612 | 56004.4 |
| d-serine ammonia-lyase | HMPREF3040_00866 | Not Available | Negative | 834718 - 836049 | 47990.4 |
| hypothetical protein | HMPREF3040_00867 | Not Available | Negative | 836067 - 836285 | 7852.59 |
| sugar-binding domain protein | HMPREF3040_00868 | Not Available | Positive | 836528 - 837523 | 36515.9 |
| sucrose-6-phosphate hydrolase | HMPREF3040_00869 | Not Available | Negative | 837531 - 838973 | 54914.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





