Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin import atp-binding protein hmuv | HMPREF3040_00839 | Not Available | Positive | 803571 - 804341 | 28897.0 |
| mg2+ transporter-c family protein | HMPREF3040_00840 | Not Available | Negative | 804393 - 805040 | 23214.9 |
| putative protein hdeb | HMPREF3040_00841 | Not Available | Negative | 805104 - 805442 | 12523.1 |
| chaperone-like protein hdea | HMPREF3040_00842 | Not Available | Negative | 805546 - 805878 | 11858.2 |
| protein hded | HMPREF3040_00843 | Not Available | Positive | 806133 - 806705 | 20890.6 |
| transcriptional regulator gade | HMPREF3040_00844 | Not Available | Positive | 807424 - 808029 | 23614.0 |
| hypothetical protein | HMPREF3040_00845 | Not Available | Positive | 808073 - 808366 | 10972.8 |
| acriflavine resistance protein a | HMPREF3040_00846 | Not Available | Positive | 808368 - 809525 | 41207.0 |
| inner membrane multidrug efflux protein bpeb | HMPREF3040_00847 | Not Available | Positive | 809550 - 812663 | 111567.0 |
| transcriptional regulator gadw | HMPREF3040_00849 | Not Available | Negative | 813026 - 813754 | 28002.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





