Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin transport protein hmus | HMPREF3040_00829 | Not Available | Negative | 795389 - 796417 | 38631.9 |
| tonb-dependent heme/hemoglobin receptor family protein | HMPREF3040_00831 | Not Available | Negative | 796466 - 798355 | 69196.9 |
| hypothetical protein | HMPREF3040_00830 | Not Available | Positive | 798354 - 798530 | 6416.96 |
| hypothetical protein | HMPREF3040_00832 | Not Available | Positive | 798556 - 798687 | 4871.0 |
| hypothetical protein | HMPREF3040_00833 | Not Available | Negative | 798724 - 798879 | 6054.45 |
| periplasmic binding protein | HMPREF3040_00834 | Not Available | Positive | 799132 - 800046 | 32777.9 |
| radical sam domain protein | HMPREF3040_00835 | Not Available | Positive | 800066 - 801403 | 49578.2 |
| hypothetical protein | HMPREF3040_00836 | Not Available | Positive | 801416 - 801910 | 18330.8 |
| hypothetical protein | HMPREF3040_00837 | Not Available | Positive | 801910 - 802533 | 21768.1 |
| iron chelate uptake abc transporter, fect family, permease protein | HMPREF3040_00838 | Not Available | Positive | 802618 - 803574 | 33972.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





