Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arsr family | HMPREF3040_00819 | Not Available | Positive | 786189 - 786542 | 12939.0 |
| arsenical resistance operon trans-acting repressor arsd | HMPREF3040_00820 | Not Available | Positive | 786590 - 786952 | 12959.7 |
| arsenite-transporting atpase | HMPREF3040_00821 | Not Available | Positive | 786970 - 788721 | 63616.7 |
| arsenic efflux pump protein arsb | HMPREF3040_00822 | Not Available | Positive | 788764 - 790053 | 45582.2 |
| arsenate reductase | HMPREF3040_00823 | Not Available | Positive | 790066 - 790491 | 15993.4 |
| transcriptional regulator, arsr family | HMPREF3040_00824 | Not Available | Negative | 790625 - 790921 | 10842.5 |
| putative permease | HMPREF3040_00825 | Not Available | Positive | 791029 - 792030 | 35229.8 |
| hypothetical protein | HMPREF3040_00826 | Not Available | Positive | 792611 - 793834 | 47085.6 |
| putative outer membrane protein slp | HMPREF3040_00827 | Not Available | Positive | 793905 - 794645 | 27921.7 |
| transcriptional regulator, luxr family | HMPREF3040_00828 | Not Available | Positive | 794798 - 795328 | 20442.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





