Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| auxiliary transport protein, membrane fusion protein family protein | HMPREF3040_00799 | Not Available | Negative | 767387 - 768454 | 38858.6 |
| hypothetical protein | HMPREF3040_00800 | Not Available | Positive | 768712 - 768831 | 4537.35 |
| hypothetical protein | HMPREF3040_00801 | Not Available | Negative | 768820 - 770442 | 61196.0 |
| hypothetical protein | HMPREF3040_00802 | Not Available | Negative | 770704 - 772293 | 60819.9 |
| hypothetical protein | HMPREF3040_00803 | Not Available | Negative | 772268 - 772408 | 5504.9 |
| hypothetical protein | HMPREF3040_00804 | Not Available | Positive | 772634 - 773728 | 39128.1 |
| flavoprotein family protein | HMPREF3040_00805 | Not Available | Negative | 774043 - 775245 | 43801.6 |
| low-affinity inorganic phosphate transporter 1 | HMPREF3040_00806 | Not Available | Positive | 775477 - 776976 | 53392.4 |
| putative universal stress protein b | HMPREF3040_00807 | Not Available | Negative | 777047 - 777328 | 11063.5 |
| universal stress family protein | HMPREF3040_00808 | Not Available | Positive | 777773 - 778207 | 16067.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





