Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | HMPREF3040_00748 | Not Available | Positive | 724626 - 725171 | 20031.3 |
| conjugal transfer protein trbj | HMPREF3040_00749 | Not Available | Positive | 725161 - 725448 | 10489.9 |
| conjugal transfer protein trbf | HMPREF3040_00750 | Not Available | Positive | 725396 - 725821 | 17152.9 |
| amp-binding enzyme | HMPREF3040_00772 | Not Available | Positive | 740729 - 742129 | 52728.7 |
| faba-like domain protein | HMPREF3040_00773 | Not Available | Positive | 742116 - 742469 | 13691.5 |
| hypothetical protein | HMPREF3040_00774 | Not Available | Positive | 742514 - 744136 | 60645.6 |
| acyl-coa thioester hydrolase, ybgc/ybaw family | HMPREF3040_00775 | Not Available | Positive | 744140 - 744562 | 16620.8 |
| outer membrane lipoprotein carrier protein lola | HMPREF3040_00776 | Not Available | Positive | 744559 - 745164 | 23208.9 |
| hypothetical protein | HMPREF3040_00777 | Not Available | Positive | 745133 - 747451 | 83991.0 |
| hypothetical protein | HMPREF3040_00778 | Not Available | Positive | 747448 - 748032 | 21408.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





