Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_00738 | Not Available | Negative | 718464 - 718682 | 7791.83 |
| acyltransferase | HMPREF3040_00739 | Not Available | Positive | 718714 - 719460 | 29352.9 |
| hypothetical protein | HMPREF3040_00740 | Not Available | Negative | 719501 - 720931 | 52561.8 |
| hypothetical protein | HMPREF3040_00741 | Not Available | Negative | 720921 - 721061 | 5530.82 |
| thiol:disulfide interchange protein dsba | HMPREF3040_00742 | Not Available | Negative | 721086 - 721712 | 23105.8 |
| protein rdoa | HMPREF3040_00743 | Not Available | Negative | 721729 - 722715 | 38113.4 |
| hypothetical protein | HMPREF3040_00744 | Not Available | Negative | 722792 - 723061 | 10273.5 |
| molybdopterin-guanine dinucleotide biosynthesis protein a | HMPREF3040_00745 | Not Available | Positive | 723140 - 723715 | 21292.6 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | HMPREF3040_00746 | Not Available | Positive | 723712 - 724224 | 18789.7 |
| type-f conjugative transfer system pilin chaperone traq | HMPREF3040_00747 | Not Available | Positive | 724403 - 724639 | 8950.96 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





